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| - This workshop will involve domain scientists and technologists meeting together to clarify the specific technical needs and requirements of two initial Scientific Use Cases for the REAP Project: one involving the access to and modeling of Sea Surface Temperature Data; and the other involving the monitoring and analysis of real-time land-based environmental sensors over a broad spatiotemporal range. Both Use Cases were chosen to not only address some challenging areas regarding access to and integration of important environmental data, but also to incorporate these into scientific workflows in order to facilitate documentation, replication, and sharing of executable analyses and models. |
| + This workshop will involve domain scientists and technologists meeting together to clarify the specific technical needs and requirements of two initial Scientific Use Cases for the REAP Project: one involving the access to and modeling of Sea Surface Temperature Data; and the other involving the monitoring and analysis of real-time land-based environmental sensors over a broad spatiotemporal range. Both Use Cases were chosen to not only address some challenging areas regarding access to and integration of important environmental data, but also to incorporate these into scientific workflows in order to facilitate documentation, replication, and sharing of executable analysis and models. |
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| - Venue: __NCEAS, UC Santa Barbara__\\ |
| - Dates: __July 24-27, 2007__ |
| + Venue: __NCEAS, UC Santa Barbara__([directions and contact info|http://www.nceas.ucsb.edu/contact])\\ |
| + Dates: __July 24-26, 2007__ |
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| - TBD |
| + * __Scientific Workflows:__ [Report from a recent NSF workshop on scientific workflows|http://vtcpc.isi.edu/wiki/images/3/3a/NSFWorkflowFinal.pdf] |
| + * __Kepler:__ [An overview paper on Kepler|http://www.sdsc.edu/~ludaesch/Paper/ssdbm04-kepler.pdf] |
| + * __Oceanographic Usecase:__ [Diagram for SST case study|Ocean_SST/WorkFlow4.pdf] |
| + * __Terrestrial Ecology Usecase:__ [Pathogen-induced reversal of native dominance in a grassland community|RequirementsWorkshop2007/borer-etal-2007-pnas.pdf] |
| + * __Workflow Example:__ [Ecological Niche Modeling in Kepler|http://reap.ecoinformatics.org/attach?page=RequirementsWorkshop2007%2FGuideToENM.pdf] |
| + * [Use Case Template|UseCaseTemplate] |
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| - |Cherie Briggs cbriggs@berkeley.edu |
| - |Peter Cornillon pcornillon@opendap.org |
| - |Shenfu Dong Shenfu.Dong@noaa.gov |
| - |Eric Graham egraham@cens.ucla.edu |
| - |Stan Harpole wharpole@uci.edu |
| - |Dan Higgins higgins@nceas.ucsb.edu (NCEAS; no lodging) |
| - |Parviez Hosseini hosseini@princeton.edu |
| - |Andy Jessup jessup@apl.washington.edu |
| - |Matt Jones jones@nceas.ucsb.edu (NCEAS; no lodging) |
| - |Duncan Menge dmenge@princeton.edu |
| - |Nathan Potter ndp@opendap.org |
| - |Dave Roberts droberts@montana.edu |
| - |Mark Schildhauer schild@nceas.ucsb.edu (NCEAS; no lodging) |
| - |Eric Seabloom seabloom@science.oregonstate.edu |
| - |Andy Thomas thomas@maine.edu |
| - |Zhang Huaimin huai-min.Zhang@noaa.gov |
| + |Cherie Briggs | UCB | cbriggs at berkeley.edu |
| + |Christian Buckingham| URI |c.buckingham at gso.uri.edu |
| + |Peter Cornillon | OPeNDAP, URI | pcornillon at opendap.org |
| + |Ellen Damschen | NCEAS | damschen at nceas.ucsb.edu |
| + |Shenfu Dong | NOAA | Shenfu.Dong at noaa.gov |
| + |James Gallagher | OPeNDAP | jgallagher at opendap.org |
| + |Eric Graham | UCLA | egraham at cens.ucla.edu |
| + |Stan Harpole | UCI | wharpole at uci.edu |
| + |Dan Higgins | NCEAS | higgins at nceas.ucsb.edu |
| + |Parviez Hosseini | Princeton | hosseini at princeton.edu |
| + |Huai Min Zhang | NOAA | huai-min.Zhang at noaa.gov |
| + |Matt Jones | NCEAS | jones at nceas.ucsb.edu |
| + |Duncan Menge | Princeton | dmenge at princeton.edu |
| + |Nathan Potter | OPeNDAP | ndp at opendap.org |
| + |Dave Roberts | UM | droberts at montana.edu |
| + |Carlos Rueda | UC Davis | carueda at ucdavis.edu |
| + |Mark Schildhauer | NCEAS | schild at nceas.ucsb.edu |
| + |Eric Seabloom | OSU | seabloom at science.oregonstate.edu |
| + |Andy Thomas | Maine | thomas at maine.edu |
| + |Jianting Zhang | UC Davis | jianting at cs.ucdavis.edu |
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| - !! Agenda (tentative) |
| + !! Agenda |
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| - * 8:30 am - 9:00 am: Kepler and REAP Overview (Matthew Jones, NCEAS) |
| - * 9:00 am - 9:30 am: Background and Examples on Scientific Workflows in Kepler (Ilkay Altintas, SDSC) |
| - * 9:30 am - 9:50 am: Terrestrial Ecology Use Case Investigating Plant-Pathogen Interactions: Short Overview (Eric Seabloom, OSU) |
| - * 9:50 am - 10:10 am: Oceanographic Use Case for Sea Surface Temperature (SST): Short Overview (Peter Cornillon, URI) |
| - * 10:10 am - 10:30 am: __Coffee Break__ |
| - * 10:30 am - 11:45 am: Dicussion on goals for the rest of the workshop and break out groups (Moderator: Matthew Jones, NCEAS) |
| + * 8:30 am - 9:15 am: [REAP and Kepler Overview|20070724-jones-reap-overview.ppt] (Matthew Jones, NCEAS) |
| + * 9:15 am - 9:35 am: [Terrestrial Ecology Use Case Investigating Plant-Pathogen Interactions: Short Overview|20070724-seabloom-reap-mtg-2.ppt] (Eric Seabloom, OSU) |
| + * 9:35 am - 9:55 am: Terrestrial Use Case Discussion |
| + * 9:55 am - 10:15 am: [Oceanographic Use Case for Sea Surface Temperature (SST): Short Overview|20070724-cornillon-sst-reap.pdf] (Peter Cornillon, OPeNDAP & URI) |
| + * 10:15 am - 10:35 am: Oceanographic Use Case Discussion |
| + * 10:35 am - 10:55 am: __Coffee Break__ |
| + * 10:55 am - 11:25 am: [Background and Examples on Scientific Workflows in Kepler|20070724-altintas-kepler.ppt] (Ilkay Altintas, SDSC) |
| + * 11:25 am - 11:45 am: Workflows in Kepler Discussion |
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| - * 1:00pm: |
| + * 1:00 pm - 1:15 pm: Discussion on goals for the rest of the workshop and break out groups (Moderator: Mark Schildhauer, NCEAS) |
| + * 1:15 pm - 2:15 pm: Break out into Use Case groups, general description of science problem, list of related problems |
| + ** Group #1: Terrestrial (Moderator: Eric Seabloom, OSU) |
| + ** Group #2: Oceanographic (Moderator: Peter Cornillon, OPeNDAP & URI) |
| + * 2:15 pm - 2:45 pm: __Break__ |
| + * 2:45 pm - 4:00 pm: Broken out Use Case groups: draw high-level conceptual view of workflow |
| + * 4:00 pm - 4:20 pm: __Break__ |
| + * 4:20 pm - 5:00 pm: Broken out Use Case groups: define usecases |
| At line 69 added 3 lines. |
| + * 7:00 pm: Possible and optional Dinner. |
| + |
| + |
| At line 71 added 4 lines. |
| + * 8:30 am - 10:00 am: Broken out Use Case groups: define usecases and formal requirements |
| + * 10:00 am - 10:20 am: __Coffee Break__ |
| + * 10:20 am - 11:00 am: Broken out Use Case groups: define usecases and formal requirements |
| + * 11:00 am - 11:45 am: Report back on usecases |
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| - * 1:00pm: |
| + * 1:00 pm - 1:20 pm: Goals for workflow development (Matthew Jones, NCEAS) |
| + * 1:20 pm - 5:00 pm: Broken out Use Case groups: workflow development |
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| - * 11:45 am: __Lunch__ |
| - * 1:00pm: |
| + * 8:30 am - 10:20 am: Broken out Use Case groups: workflow development |
| + * 10:20 am - 10:40 am: __Coffee Break__ |
| + * 10:40 am - 12:30 pm: Present workflows. Discussion. |
| + * 12:30 pm: __Adjourn__ |
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| - ! Friday, July 27, 2007 |
| - * 8:00 am: __Coffee__ |
| - * 11:45 am: __Lunch__ |
| - * 1:00pm: |
| + |
| + !! Meeting Results |
| + |
| + [Terrestrial usecases|terrestrial_usecases]\\ |
| + [Oceanographic usecases|Ocean_SST] |
